TCRBuilder: multi-state T-cell receptor structure prediction

Conserved structure of amphibian T - cell antigen receptor 8 chain ( T - ceil receptor / urodele amphibian / evolution )

All jawed vertebrates possess well-differentiated thymuses and elicit T-cell-like cell-mediated responses; however, no surface T-cell receptor (TCR) molecules or TCR genes have been identified in ectothermic vertebrate species. Here we describe cDNA clones from an amphibian species, Ambystoma mexicanum (the Mexican axolotl), that have sequences highly homologous to the avian and mammalian TCRI3...

Diversity of T-cell receptor Gene Rearrangements in South Indian Patients with Common Acute Lymphoblastic Leukemia

Background: Precursor B-Acute Lymphoblastic Leukemia (precursor B-ALL) oc-curs due to the uncontrolled proliferation of B-lymphoid precursors arrested at a par-ticular stage of B-cell development. Precursor-B-ALL is classified mainly into pro-B-ALL, common-ALL and pre-B-ALL. The Common Acute Lymphoblastic Antigen CD10 is the marker for common-ALL. Objective: This study was aimed to examine the ...

Structure prediction: The state of the art

A recent meeting to evaluate the state of the art of protein structure prediction saw progress on all fronts; for prediction methods based on comparative modeling or fold recognition, the progress was incremental, but in the case of ab initio structure prediction, some surprising successes were reported.

LOGICOIL - multi-state prediction of coiled-coil oligomeric state

MOTIVATION The coiled coil is a ubiquitous α-helical protein-structure domain that directs and facilitates protein-protein interactions in a wide variety of biological processes. At the protein-sequence level, the coiled coil is readily recognized via a conspicuous heptad repeat of hydrophobic and polar residues. However, structurally coiled coils are more complicated, existing in a wide range ...

T cell gamma receptor.